track JASPAR2024_TFBS_araTha1
shortLabel JASPAR2024 TFBS araTha1
longLabel TFBS predictions in Arabidopsis thaliana (araTha1) for all profiles in the JASPAR CORE plants collection (2024)
html https://frigg.uio.no/ftp/mathelier/JASPAR_genome_browser_tracks/2024/JASPAR2024_TFBS_help.html
type bigBed 6 +
labelFields name
defaultLabelFields name
searchIndex name
visibility pack
spectrum on
bigDataUrl https://frigg.uio.no/ftp/mathelier/JASPAR_genome_browser_tracks/2024/araTha1/JASPAR2024_araTha1.bb
maxItems 100000
filter.score 400
filterByRange.score 0:1000
filterValues.name 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track JASPAR2022_TFBS_araTha1
shortLabel JASPAR2022 TFBS araTha1
longLabel TFBS predictions in Arabidopsis thaliana (araTha1) for all profiles in the JASPAR CORE plants collection (2022)
html http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/JASPAR2022_TFBS_help.html
type bigBed 6 +
labelFields TFName
defaultLabelFields TFName
searchIndex name
visibility pack
spectrum on
bigDataUrl http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2022/JASPAR2022_araTha1.bb
maxItems 100000
filter.score 400
filterByRange.score 0:1000
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track JASPAR2020_TFBS_araTha1
shortLabel JASPAR2020 TFBS araTha1
longLabel TFBS predictions in Arabidopsis thaliana (araTha1) for all profiles in the JASPAR CORE plants collection (2020)
html http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/JASPAR2020_TFBS_help.html
type bigBed 6 +
labelFields name
defaultLabelFields name
searchIndex name
visibility pack
spectrum on
bigDataUrl http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_araTha1.bb
maxItems 100000
filter.score 400
filterByRange.score 0:1000
filterValues.name ABF1,ABF2,ABF3,ABF4,ABI3,abi4,ABI5,ABR1,Adof1,AG,AGL1,AGL13,AGL15,AGL16,AGL25,AGL27,AGL3,AGL42,AGL55,AGL6,AGL63,AHL12,AHL20,AHL25,AIB,AIL7,ANAC050,ANAC13,ANL2,ANT,AP1,AP3,ARALYDRAFT_484486,ARALYDRAFT_493022,ARALYDRAFT_495258,ARALYDRAFT_496250,ARALYDRAFT_897773,AREB3,ARF1,ARF10,ARF13,ARF14,ARF16,ARF18,ARF2,ARF25,ARF27,ARF29,ARF3,ARF34,ARF35,ARF36,ARF39,ARF4,ARF5,ARF7,ARF8,ARR1,ARR10,ARR11,ARR14,ARR18,ARR2,AT1G01250,AT1G12630,AT1G13300,AT1G14580,At1g19000,AT1G22810,AT1G36060,AT1G44830,AT1G47655,At1g49010,AT1G69570,AT1G71450,At1g72010,AT1G72740,At1g74840,AT1G75490,AT1G76870,AT1G76880,AT1G77640,AT2G20110,AT2G28810,AT2G33710,AT2G33710,At2g38090,AT2G40260,AT2G44940,At2g45680,At3g09600,AT3G10030,AT3G10030,AT3G10113,AT3G10580,At3g11280,AT3G16280,AT3G24120,AT3G25990,AT3G45610,AT3G46070,AT3G52440,AT3G57600,AT4G12670,AT4G16750,AT4G18450,AT4G28140,AT4G31060,AT4G32800,AT5G02460,At5g05790,At5g08520,AT5G18450,At5g47390,AT5G47660,AT5G56840,At5g58900,AT5G61620,AT5G66940,AT5G67000,AT-GTL1,ATHB-12,ATHB13,ATHB15,ATHB-16,ATHB18,ATHB20,ATHB23,ATHB23,ATHB25,ATHB34,ATHB4,ATHB40,ATHB-5,ATHB-5,ATHB-51,ATHB53,ATHB-6,ATHB7,ATHB-9,BEE2,BEH2,BEH3,BEH4,BHLH104,BHLH112,BHLH13,bHLH130,bHLH18,BHLH3,bHLH31,BHLH34,bHLH69,bHLH74,bHLH77,BHLH78,bHLH80,BIM1,BIM2,BIM3,BPC1,BPC5,BPC6,bZIP14,bZIP16,bZIP28,bZIP3,bZIP42,bZIP43,bZIP44,bZIP48,bZIP50,bZIP52,bZIP53,BZIP60,bZIP68,bZIP68,bZIP68,bZIP910,bZIP911,BZR1,BZR2,CAMTA1,CBF1,CBF2,CBF4,CCA1,CDC5,CDF2,CDF3,CDF3,CEJ1,CMTA2,CMTA3,COG1,CRF2,CRF4,CRF4,DAG2,DEAR3,DEAR5,DOF1.8,Dof2,DOF2.4,DOF2.5,Dof3,dof4.2,dof4.5,DOF5.3,DOF5.6,DOF5.7,DPBF3,DPBF3,DRE1C,DREB19,DREB1A,DREB1B,DREB1C,DREB1E,DREB1G,DREB2,DREB26,DREB2C,DYT1,E2FA,EDT1,EFM,EmBP-1,EPR1,ERF008,ERF015,ERF017,ERF018,ERF019,ERF021,ERF027,ERF035,ERF037,ERF039,ERF039,ERF043,ERF069,ERF087,ERF094,ERF096,ERF098,ERF10,ERF104,ERF105,ERF109,ERF11,ERF11,ERF112,ERF118,ERF13,ERF13,ERF15,ERF1B,ERF2,ERF3,ERF3,ERF38,ERF38,ERF4,ERF4,ERF5,ERF6,ERF7,ERF8,ERF9,ESE1,ESE3,F3A4.140,FaEOBII,FAR1,FHY3,FLC,Foxn1,FUS3,FUS3,Gam1,GATA10,GATA11,GATA12,GATA14,GATA15,GATA19,GATA20,GATA6,GATA8,GATA9,GBF2,GBF3,GBF6,Glyma19g26560.1,GT-1,GT-2,GT-4,GT-A3,HAT1,HAT2,HAT22,HAT5,HBI1,HDG1,HHO2,HHO3,HHO5,HHO6,HMG-1,HMG-I/Y,HSFA6B,HSFB2A,HSFB2B,HSFC1,HY5,HYH,id1,IDD2,IDD4,IDD5,IDD7,JKD,KAN1,KAN2,KAN4,KUA1,LBD18,LCL1,LEC2,LEP,LFY,LHY1,MGP,MNB1A,MNJ7.25,MYB1,MYB101,MYB105,MYB111,MYB113,MYB118,MYB119,MYB124,MYB15,MYB24,MYB27,MYB3,MYB33,MYB33,MYB3R1,MYB3R4,MYB3R5,MYB4,MYB46,MYB52,MYB55,MYB56,MYB57,MYB59,MYB62,MYB65,MYB70,MYB70,MYB73,MYB73,MYB77,MYB81,MYB98,myb.Ph3,MYC2,MYC3,MYC4,MYR2,NAC017,NAC025,NAC028,NAC029,NAC043,NAC055,NAC058,NAC062,NAC078,NAC080,NAC083,NAC92,NTL8,NTL9,NUC,O2,OBP1,OBP3,OBP4,OJ1058_F05.8,OJ1581_H09.2,Os05g0497200,OsI_08196,OsRR22,P0510F09.23,PBF,PEND,PHL1,PHL11,PHL12,PHL7,PHYPADRAFT_140773,PHYPADRAFT_143875,PHYPADRAFT_153324,PHYPADRAFT_173530,PHYPADRAFT_182268,PHYPADRAFT_28324,PHYPADRAFT_38837,PHYPADRAFT_48267,PHYPADRAFT_64121,PHYPADRAFT_72483,PI,PIF1,PIF3,PIF4,PIF5,PIF7,PLT1,PLT3,POPTR_0002s00440g,PTF1,PUCHI,RAMOSA1,RAP21,RAP2-1,RAP210,RAP2-10,RAP2-10,RAP211,RAP212,RAP2-3,RAP26,RAP2-6,RAV1,RAV1(var.2),RAX3,REF6,RVE1,RVE5,RVE6,RVE7,SEP1,SEP3,SGR5,SIZF2,SMZ,SOC1,SOL1,SPL1,SPL11,SPL12,SPL13,SPL14,SPL15,SPL3,SPL3,SPL3,SPL4,SPL5,SPL7,SPL8,SPL9,SPT,squamosa,SRM1,StBRC1,STZ,SVP,T11I18.17,TB1,TBP3,TCP1,TCP14,TCP15,TCP15,TCP16,TCP17,TCP19,TCP2,TCP20,TCP20,TCP21,TCP23,TCP24,TCP3,TCP4,TCP5,TCP7,TCP8,TCX2,TCX3,TGA1,TGA10,TGA1A,TGA2,TGA3,TGA4,TGA5,TGA5,TGA6,TGA7,TGA9,TINY,TRB1,TRB2,TRP1,TRP2,TSAR1,TSAR2,TSO1,UIF1,UNE10,WRKY11,WRKY12,WRKY14,WRKY15,WRKY15,WRKY17,WRKY18,WRKY2,WRKY20,WRKY21,WRKY22,WRKY23,WRKY24,WRKY25,WRKY26,WRKY27,WRKY28,WRKY28,WRKY29,WRKY3,WRKY30,WRKY31,WRKY33,WRKY38,WRKY40,WRKY42,WRKY43,WRKY45,WRKY46,WRKY47,WRKY48,WRKY50,WRKY55,WRKY57,WRKY59,WRKY6,WRKY60,WRKY62,WRKY63,WRKY65,WRKY7,WRKY70,WRKY71,WRKY75,WRKY8,ZAP1,ZHD1,ZHD3,ZHD5,ZHD6